BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034C11LP1|AL429881
(852 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1270 1656 0.0
>3x_Contig1270
Length = 7505
Score = 1656 bits (834), Expect = 0.0
Identities = 848/853 (99%), Gaps = 1/853 (0%)
Strand = Plus / Minus
Query: 1 gatccattctttttttaaaccaaaatccgaag-ttcagcatctacttcactgaaagaaga 59
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 5168 gatccattctttttttaaaccaaaatccgaaggttcagcatctacttcactgaaagaaga 5109
Query: 60 aagcgaattcgaggaaactgatgaaggtgataccgctgaaatcaagagagagcactcaga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5108 aagcgaattcgaggaaactgatgaaggtgataccgctgaaatcaagagagagcactcaga 5049
Query: 120 tactagaccacccagcaatgataacgaatctgatgatcctcctgctaaaagagttaaaag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5048 tactagaccacccagcaatgataacgaatctgatgatcctcctgctaaaagagttaaaag 4989
Query: 180 agagcgaagttgaatgggaaatggagtcttttctagtatatagttgagtwatcattatat 239
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 4988 agagcgaagttgaatgggaaatggagtcttttctagtatatagttgagtaatcattatat 4929
Query: 240 ctatactatatcaaataccagttttctatctcacattatcgtaatgaacgttcaatagtt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4928 ctatactatatcaaataccagttttctatctcacattatcgtaatgaacgttcaatagtt 4869
Query: 300 gacctactaggtacaatgaaccacagacaacgaccttggtctctggtcctgattgtgcca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4868 gacctactaggtacaatgaaccacagacaacgaccttggtctctggtcctgattgtgcca 4809
Query: 360 atgccggcaggatatcgaataaatcacggttaacttcaacgttcttcgtgaaatgtccta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4808 atgccggcaggatatcgaataaatcacggttaacttcaacgttcttcgtgaaatgtccta 4749
Query: 420 cttgcgatgccaagtcgtaagcatccatgggcttaatccatggcattccttccacagagc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4748 cttgcgatgccaagtcgtaagcatccatgggcttaatccatggcattccttccacagagc 4689
Query: 480 caaattcagtacagataactttatcctggggccttataattggtgatagcaacggttcta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4688 caaattcagtacagataactttatcctggggccttataattggtgatagcaacggttcta 4629
Query: 540 gagtcttgccgttagtgattgcnattacaaacgtcaacggctcatctttactgaacctga 599
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 4628 gagtcttgccgttagtgattgcaattacaaacgtcaacggctcatctttactgaacctga 4569
Query: 600 actcggtatctaagttcttggccaattcaacggctgcgctcccattatgggcaccatcga 659
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4568 actcggtatctaagtacttggccaattcaacggctgcgctcccattatgggcaccatcga 4509
Query: 660 aaagaacaggtgtagttttacggggagagtwatgataattgatgaattgtaaccgccccg 719
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 4508 aaagaacaggtgtagttttacggggagagtaatgataattgatgaattgtaaccgccccg 4449
Query: 720 gccattctgccgtctgtatcccatccaggatttgattcgagtcaagttgaatcatcccag 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4448 gccattctgccgtctgtatcccatccaggatttgattcgagtcaagttgaatcatcccag 4389
Query: 780 ttctctgcatataatctaatatctgtatagcgacctgaacatttgttacttgatattcac 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4388 ttctctgcatataatctaatatctgtatagcgacctgaacatttgttacttgatattcac 4329
Query: 840 catttagaggcag 852
|||||||||||||
Sbjct: 4328 catttagaggcag 4316
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5709
Number of Sequences: 1807
Number of extensions: 5709
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 852
length of database: 10,358,551
effective HSP length: 16
effective length of query: 836
effective length of database: 10,329,639
effective search space: 8635578204
effective search space used: 8635578204
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)